Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTLPTQIAPNSSTSMAPTFLLVGMPGLSGAPSWWTLPLIAVYLLSALGNGTILWIIALQPALHRPMHFFLFLLSVSDIGLVTALMPTLLGIALAGAH-TVPASACLLQMVFIHVFSVMESSVLLAMSIDRALAICRP-----------LHYPALLTNGVISKISLAISFRCLGLH----------LPLPFLLAYMPYCLPQVLTHSYCLHPDVARLACPEAWGAA------YSLFVVLSAM-------------GLDPLLIFFSYGLIGKVLQGVESREDRWKAGQTCAAHLSAVLLFYIPMILLALIN---------HPELPITQHTHTLLSYVHFL--LPPLINPILYSVKMKEIRKRILNRLQPRKVGGAQ |
| 4XNV Chain:A ((38-382)) | -----SFKCALTKTGF--------------QFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTL-PALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAM-FCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237123 for 2032 contacts (-116.7/contact) +
2D Compatibility (PS) -29245 + (NN) -2029 + (LL) 1712
1D Compatibility (HY) -24000 + (ID) 2800
Total energy: -293485.0 ( -144.43 by residue)
QMean score : 0.214
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