Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------MPTFNG--------SVFMPSAFILIGIPGL----------ESVQCWIGIPFSAMYLIGVIGN-------SLILVIIKYENSLHIPMYIFLAM--LAATDIALNTCILPKMLGIFWFHLPEISFDACL-FQMWLIHSFQ---AIESGILLAMALDRYVAICIPLRHATIFSQQFLTHIGLGVTLRAAILIIPSLGLIKCCLKHYRTTVISHSYCEHM---------AIVKLATEDIRVNK-IYGLFVAFAILGFDIIFITLSYVQIFITVFQLPQKEARFKAFNTCIAHICVFLQ-------------FYLLAFFSFFTHRFGS---------HIPPYIHILLS----NLYLLVPPFLNPIVYGVKTKQIRDHIVKVFFFKKVT |
| 4XR7 Chain:B ((1-456)) | MHSLLQYRSADQLFIPNNIREDLTKKNLSILQVFPSSGKVIPSIVQDYFNLVPLNFNNKTTLFKVFSNYDGKAYVLKRLPNIDKSMNPNKISKIYQIWSKINCTNLIKFRDIFQTTKFGDLSICLVFDYYPNSLSLYDYHFVNFPKFPITNNYLWIYLVQLTNVINSIHSQNLSIGNTLNWRKVLITGDPGRIKLSHCNFMDLLFNDDTD---TVVSSTIEGQQQLDYKYLGELLFNLSINIENSNN-NTAPKEYRLEEITPQSIDDMRQIDDKFKDVLKYLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLVNKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDELNCIIIS--YKELKDLIESTFRSITQH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -320858 for 1959 contacts (-163.8/contact) +
2D Compatibility (PS) -31778 + (NN) -2630 + (LL) 924
1D Compatibility (HY) -15200 + (ID) 3350
Total energy: -372892.0 ( -190.35 by residue)
QMean score : 0.111
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