Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MNLDSFFSFLLKSLIMALSN--------------SSWRLPQ----PSFFLVGIPGLEESQHW---IALPLGILYLLALVGNVTIL-----FIIWMDPSL-HQSMYLFLSMLAAIDLVVAS----------STAPKALAVLLVRA-----QEIGY-------TVCLIQMFFTHAFSSMESGVLVAMAL----------------DRYVAIC------------HPLHHSTILHP---------GVIGHIGMVVLVRGL--LLLIPFLILLRKLIFCQA----TIIG-----------HAYCEHMAVVKLACSETTVNRAYGLTVALLVVGLDVLAIGVSYAHILQ-------AVLKVPGNEARLKAFSTCGSHVCVILVFYIPGMFSFLTHRFGHHVP--------HHVHVLLAILYRLVPPALNPLVYRVKTQKIHQ--------------------------- |
| 4TR2 Chain:A ((54-627)) | DDVHKIISELRFLQKVETILESSNMSVSDVEADANAYNPDRDAPKEELQKLQDKKSLRLIVSENHATSPSFFEESLLQEDVVSFIQSKGKLSNLKNLKSMIIDLNSDMTDEELAEYISLLERKGALIESDKLVGADYKFNDEYRNLQWGLDLARLDETQDLINANRVSVTKICVIDSGIDYNHPDLRNNIDVNVKELHGRKGVDDDSNGVVDDVYGANFVNNSGDPMDDNYHGTHVSGIISAVGNNGIGIVGVDGH-SKLVICKALDQHKLGRLGDMFKCIDYCISRQAHMINGSFSFDEYSNIFNASVEHLRSLGILFFVSASNCAHDKLSKPDIAKCD-LAVNHRYPPILSKTHNNVIAVANLKRDLDESYSLSVNSFYSNIYCQLAAPGTNIYSTTPMNNYRKLNGTSMASPHVAAIASIVRSINPNLTYLQIVEILRNAIVKLPSLTERVSWGGYVDILRAVNLAIDSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -335516 for 2352 contacts (-142.7/contact) +
2D Compatibility (PS) -33064 + (NN) -3291 + (LL) 396
1D Compatibility (HY) -10000 + (ID) 3100
Total energy: -384575.0 ( -163.51 by residue)
QMean score : 0.156
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