Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLASGNSSSHPVSFILLGIPGLESFQLWIAFPFCATYAVAV--VGNITLLHVIRIDHTLHEPMYLFLAMLAITDLVLSSSTQPKMLAIF----WFHAHEIQYHACLIQVFFIHAFSSVESGVLMAMALDCYVAICFPLRHSSILTPSVVIKLGTIVMLRGLLWVSPF----CFMVSRMPFCQHQAIPQSYCE--HMAVLKLVCADTSISRGNGLFVAFSVAGFDMIVI----GMSYVMILRAV-------LQLPSGEARLKAFSTR-SSHICVI----------LALYIPALFSFLTYRFGHDV-PRVVHILFAN---LYLLIPP--MLNPIIYGVRTKQIGDRVIQGCCGNIP |
| 4AV9 Chain:A ((14-338)) | SNPIVDYEFNQDQSCLIVSTP--KSFDIYNVHPLKRIMSQEMPDAGTIRMLH--------------------RTNYIAFVSTKKELLHIWDDVKKQDITRVKLDAAVKDLFLSREFIVVSQGD--------VISIFKFGNPWNKITEDIKFG-GVCEFANGLLVYSNEFNLGQIHVTRLQTDAEQVVGKGVLVKAHANPVKMVRLN----RKGDMVATCSQDGTLIRVFQTDNGVLVREFRRGLDRTSIIDMRWSPDGSKLAVVSDKWTLHVFEVFNDAENKRHVLKDWINSEWSICNFKLKVSKGSNDCKIAWISDTGLVIVWPNRRLADTFKLNYNDDEHVWWLQLNQRNEIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -308143 for 2094 contacts (-147.2/contact) +
2D Compatibility (PS) -30208 + (NN) -2080 + (LL) 3776
1D Compatibility (HY) -14800 + (ID) 2450
Total energy: -353905.0 ( -169.01 by residue)
QMean score : 0.182
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