Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSPIQIFRGEPGPTCAPSACLPPNSSAWFPGWAEPDSNGSAGSEDAQLEPAHISPAIPVIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNS-WPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAFVIPVLIIIVCYTLMILRLKS-----------------------------------VRLLSGSRE-----KDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALGST--------SHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFPLKMRMERQSTSRVRNTVQDPAYLRDIDGMNKPV |
| 4XNV Chain:A ((38-382)) | ------------SFKCALTK----------------------------------TGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP-KSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKN-KTITCYDTTSDEYLRSYFIYSMCTTVAM-FCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260404 for 2181 contacts (-119.4/contact) +
2D Compatibility (PS) -29156 + (NN) -2240 + (LL) 4136
1D Compatibility (HY) -28800 + (ID) 4100
Total energy: -320564.0 ( -146.98 by residue)
QMean score : 0.269
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