Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MNWVNDSIIQE--FILLGFSDRPWLEFPLLVVFLISYTVTIFG------------NLTIILVSRLDTKLHTPMYFFLTNLSLLDLCYTTCTVPQMLVNLC---SIRKVISYRGCVAQLFIFLALGAT----EYLLLAVMSFDR-------FVAICRPLHYSV--IMHQRLCLQLAAAS-----WVTGFSNSVWLSTLTLQLPLCDPYVIDHFLCEVPALLKLSCVETTANEAELFLVSELFHLIPLTLILIS-----YAFIVRAVLRIQSAEGRQKAFGTC--------GSHLIVVSLFYSTAVSVYLQPPSPSSKDQGKMVSLFYGIIAPMLNPLIYTLRNKEVKEGFKRLVARVFLIKK |
| 4L9B Chain:A ((2-393)) | VLKGINFPENEASILDLAMQNRSGVLDGMTIDILNTTSNQLALFHGTAVLQGYGIEITGAPDVLVDTTGQSNETMLLCLTIDLNQVNVPSGTAVDYKQIRLEFLD--VPTLLKQYWRDHSLHDLIDPRRVISMPLYWITFGQTGTTPLYEQIKSNYIDNSGNPAYGIAARCENFNHFINKVAVQSIPINGVANRPVSSTASQLTNYKVWRNPYLCSQDPRDKFAPDNLVIEEDGIYRIDISGSINIANYTFPARVGGRYFQIVCARNSSANNLAEFGAEQHLPPSGVWTRRVLVGEYTAGMTEQAFSSVATISLFKGDNFFLQFETGTNTSRDSA--YNNGYGTSGTHLRNFSYTLERVGDLNGTAYYDNGTF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274815 for 2227 contacts (-123.4/contact) +
2D Compatibility (PS) -31603 + (NN) 13567 + (LL) 888
1D Compatibility (HY) -4000 + (ID) 2600
Total energy: -298563.0 ( -134.07 by residue)
QMean score : 0.151
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