Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLQKLMEPEAGTNRTAVAEFILLGLVQTEEMQPVVFVLLLFAYLVTTGGNLSILAAVLVEPKLHAP-----------MYFFLGNLSVLDVGCITVTVPAMLGRLLSH----KSTISYDACLSQLFFFHLLAG--MDCFLLTAMAYDRLLAICQPLTYSTRMSQTVQRMLVAASLACAFTNALT-HTVAMSTLNFCGPNEVNHFYCDLPQLFQ--LSCSSTQLNELLL-----FAVGFIMAGTPLVLIITAYSHVAAAVLRIRS---VEGRKKAFSTCGS-------HLTVVCLFFGRGIFNYMRLGSEEASDKDKGVGVFNTVINPML--------NPLIYSLRNPDVQGALWQIFLGRRSLT |
| 3ZPJ Chain:A ((1-356)) | --MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSIIASTLAIMEY---EEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266035 for 2363 contacts (-112.6/contact) +
2D Compatibility (PS) -32792 + (NN) -13974 + (LL) 468
1D Compatibility (HY) -12400 + (ID) 2300
Total energy: -327033.0 ( -138.40 by residue)
QMean score : 0.247
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