Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENQNNVTEFILLG-LTENLELWKIFSAVFLVM-YVATVLENLLIVVTIITSQSLRSPMYFFLTFLSLLDVMFS-SVVAP-KVIVDTLSKSTTISLKGCLTQLFVEHFFGGVGIILLTV-MAYDRYVAICKPLHYTIIMSPRVCCLMVGGAWV-GGFMHAMIQLLFMYQIPF---CGPNIIDHFICDLFQLLTLACT-DTHILGLLVTLNSGMMC-VAIFLILIASYT-VILCSLKSYSSKGRHKALSTCSSHLTVVVLFFVPCIFLYMRPVVTHP-IDKAMAVSDSIITPMLN-PLIYTL-RNAEVKSAMKKLWMKWEALAGK-------- |
| 4DVG Chain:B ((8-312)) | -EVVQQKFAIVAKEMKIDNPELITIPNQWKLVQEYEKKQKKDIRIQLNAQKTGNWRNAITDPKYLADLLKTRDDMDLLNEMVVVFRSSS------------VSFIKTFVSVGG--LANLMAIYKKKIE--AENSNTAIDEERKCCEVLRYVFAEEDATVALIEIDGGVELLLKGMNSKRITPDNQLDILLEITLTSSMVEHPSQEGLYLGGDVCVMNAFSNLVSEGVDMKKFLSFFSLFSKSK-------SEKFKHASLVLINNLID--QPELEHRMDVRNSFIEIGLVNELENMKNT-EWMKIDKIKDSINDFFDSWEEDKKEVESRFDDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269376 for 1956 contacts (-137.7/contact) +
2D Compatibility (PS) -28430 + (NN) -5954 + (LL) 2444
1D Compatibility (HY) -3600 + (ID) 2250
Total energy: -307166.0 ( -157.04 by residue)
QMean score : 0.233
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