Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------MARENHSLAAEFILIGFTNYPELKTLLFVVFSAIYL----------VTMVGNLGLV--ALIYVERRLLTPMYIFLGNLALMD-------SCCSCAVTPKMLENFFSEDRIISLYECMAQFYFLCLAETTD--------CFLLATMAYDR--YVAICHPL--QYHTMMSKTLCIRMTTGAFKAGNLHSMIHVGLL--LRLTFCRSNKIHHFFCDILPLYRLSCTDPSI-NELMIYIFSIPIQIF---TIATVLISYLCILLTVFKMKSKEGRGKAFSTCASHFLSVSIFYICLLMYIGPSEEGDKDTPVAIFYAIVIPLLNPFIY-SLRNKEVINVLKKIMRNYNILKQ---TCSIANLFLIY-------------------- |
| 4Y97 Chain:A ((157-598)) | PSQKYNSRSNRGEVVTSFGLAQGVSWSGRGGAGNISLKVLGCPEALTGSYKSMFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFYQPTEEDADFE-QSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQ-CLRTIIEGTRSSGSHLVFVPSLRDVHH-EPVYPQPPFSYSDLSREDKKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLY----PPQEDMAIDYESFYVYAQLPVTPDVLIIPSELRYFVKDVLGCVCVNPGRLTKGQVGGTFARLYLRRPAADGAERQSPCIAVQVVRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -346923 for 2444 contacts (-141.9/contact) +
2D Compatibility (PS) -33223 + (NN) 2340 + (LL) 696
1D Compatibility (HY) -10800 + (ID) 3200
Total energy: -391110.0 ( -160.03 by residue)
QMean score : 0.118
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