Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MEQHNLTTVNEFILTGITDIAELQAPLFALFLMIYVISVMGNLGMIVLTKLDSRLQTPMYFFLRHLAFMDLGYSTTVGPKMLVNFVVDKNIISYYFCATQLAFFLVFIGSELFILSAMSYDLYVA--------ICNPLLYTVIMS----RRVCQVLVAIPYLYCTFISLLVTIKIFTLSFCGYNVISHFY----CDSLPLLPLLCSNTH-----EIELIIL------IFAAIDLISSLLIVLLSYLLILVAILRMNSAGR----QKAFSTCG---------AHLTVVIVFYGTL--LFMYVQPKSSHSFDTDKVASIFYTLV----IPMLNPLIYSLRNKDVKYALRRTWNNLCNIFV |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGP-MEWIPSIMEDAMYIAKKLRDPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -352520 for 2336 contacts (-150.9/contact) +
2D Compatibility (PS) -30818 + (NN) -5051 + (LL) 640
1D Compatibility (HY) -7600 + (ID) 2250
Total energy: -397599.0 ( -170.21 by residue)
QMean score : 0.271
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