Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGSLGLWALLPTAVEAPPNRRTCVFFEAPGVRGSTKTLGELLDTGTELPRAIRCLYSRCCFGIWNLTQDRAQVEMQGCRDSDEPGCESLHCDPSPRAHPSPGSTLFTCSCGTDFCNANYSHLPPPGSPGTPGSQGPQAAPGESIWMALVLLGLFLLLLLLLGSIILALLQRKNYRVRGEPVPEPRPDSGRDWSVELQELPELCFSQVIREGGHAVVWAGQLQGKLVAIKAFPPRSVAQFQAERALYELPGLQHDHIVRFITA---SRGGPGRLLSGPLLVLELHPKGSLCHYLTQYTSDWGSSLRMALSLAQGLAFLHEERWQNGQYKPGIAHRDLSSQNVLIREDGSCAIGDLGLALVLPGLTQPPAWTPTQPQGPAAIMEAGTQRYMAPELLDKTLDLQDWGMALRRADIYSLALLLWEILSRCPD--LRPDSSPPPFQLAYEAELGNTPTSDELWALAVQERRRPYIPSTWRCFATDP--DGLRELLEDCWDADPEARLTAECVQQRLAALAHPQESHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQRSACHFSVQQGPCSRNPQPACTLSPV |
4BGG Chain:D ((9-300)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT------QLW----LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF-G---KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD-VGNNPR-------VGTKRYMAPEVLDETIQV-DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV-----VPNDPSFEDMRKVVCVDQQRPNIPNRW---FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157161 for 2257 contacts (-69.6/contact) +
2D Compatibility (PS) -29898 + (NN) -22091 + (LL) 11252
1D Compatibility (HY) -25600 + (ID) 5250
Total energy: -228748.0 ( -101.35 by residue)
QMean score : 0.512
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