Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSAAECKQERKILVNACKAVITRKPPTPYCCERLRVTHVSCVCPVITPQLAALIDVNYAIKVIQGCGIQVPRHSKCGSITTP
M044 Chain:A ((3-129))
QSAAECKQERKILVNACKAVITRKPPTPYCCERLRVTHVSCVCPVITPQLAALIDVNYAIKVIQGCGIQVPRHSKCGSITTP
General information:
TITO was launched using:
RESULT:
Template:
M044.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2478 for 552 contacts (-4.5/contact) +
2D Compatibility (PS) -7802 + (NN) 1232 + (LL) 0
1D Compatibility (HY) 2800 + (ID) 200
Total energy: -6448.0 ( -11.68 by residue)
QMean score : 0.126
(partial model without unconserved sides chains):
PDB file :
Tito_M044.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M044-query.scw
PDB file :
Tito_Scwrl_M044.pdb
: