Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFMAATTSIADTDMEFDKNVPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCRITKDNRRHCQSCRLKRCVDIGMMKEFILTDEEVQRKRQMINKRKSEEALKESMRPKISDEQQKMIDILLEAHRKTFDTTYSDFNKFRPPVRENVDPFRRITRSSSVHTQGSPSEDSDVFTSSPDSSEHGFFSASLFGQFEYSSMGGKSGELSMLPHIADLVSYSIQKIIGFAKMIPGFRDLIAEDQIALLKSSVIEVIMLRSNQSFSLDDMSWTCGSEDFKYKVDDVTQAGHNMELLEPLVKFQVGLKKLDLHEEEHVLLMAICILSPDRPGLQDKALVESIQDRLSSTLQTYILCKHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRSISFLPEHSMKLTPLMLEVFSDEIP |
3O1E Chain:A ((5-301)) | ----------------------------------------------------------------------------------------------------------------------------LSDEQMQIINSLVEAHHKTYDDSYSDFVRFRPPVR-----------------------------------------------------------LSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCINDVTKAGHTLELLEPLVKFQVGLKKLKLHEEEHVLLMAICLLSPDRPGVQDHVRIEALQDRLCDVLQAYIRIQH--PGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O1E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142195 for 1826 contacts (-77.9/contact) +
2D Compatibility (PS) -25501 + (NN) -20228 + (LL) 9484
1D Compatibility (HY) -32400 + (ID) 9200
Total energy: -220040.0 ( -120.50 by residue)
QMean score : 0.503
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