Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLKAWLITTFLLLYPSATFCDDCNFNLPYRGLSCNLDLSHKNLSNIKKLLNNSDKFVALTFDDGPSSNRVNNIINILENYKAKATFFLLGERINKKTSEIVKKIYNAGHELGNHSWSHKKLTSLSSEKQLQELEKTNMVIKNAIERDVKWFRSPYGCHDDNLIKNTNQL-NMCSILWT---------------------------VDSLDWQGD------KPEILVDRVVGN----VHNG------AIILFHDHD-NKSNTVEALPQIIKILKKL-GYEFVTLSEWEERVCKAKGVSMGEGVFKKILCG |
| 3S6O Chain:A ((73-311)) | ------------------------------------------------------HMSMESIYEYGSRA-GVWRILREFDKRGLPLTVFGVGMAIE-RHPELARAFVELGHEIACHGWRWIHYQDMTPEREAEHMRLGMEAIERVTGVRPLGWYTGR--DSPNTHRLVAEYGGFLYDSDHYGDDLPFWMDVEVSGGASVPQLIVPYTLDANDMRFATPQGFNTADHFFHYLRDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVEIARHWREHHPY------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32173 for 1399 contacts (-23.0/contact) +
2D Compatibility (PS) -20043 + (NN) -4754 + (LL) 3448
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -59922.0 ( -42.83 by residue)
QMean score : 0.336
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