Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANTLVYQKNQGIVLDEPSVVARIKE------------KGSYIPYAFGKKAKMMLGKTPGEIEAIRPLKDGVIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAAESA--------------GANEVFLIEEPMAAAIGAGLPV---TEPEGSMVVDIGGGTTEVAIISLG--GIV--YSRSARVGGDIMDEAIRSYIRENHKLLIGETTAEKIKKSLGSASLPDENNKEWMMVKGRDLVSGMPKEMLLSEYQVAESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISETTKL-PVHV-ADDPLCCVALGSGKVLENMDYFSHVLFKQD |
| 2FSJ Chain:A ((21-344)) | ---------------------MVVVGLDVGYGDTKVIGVD-GKRIIFPSRWAVTETESWKIPVLSTDGGQTK--FIYGKYASGNN--------IRVPQGDGRLASKEAFPLIAAALWESGIHN--PVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVVPFDLAQEALSH-------------PVMFRQK--------QVGG-PEVSGPILEDLANRIIENIRLNLRGEVD----RV--TSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAERS----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125787 for 2376 contacts (-52.9/contact) +
2D Compatibility (PS) -30433 + (NN) -6283 + (LL) 3684
1D Compatibility (HY) -3200 + (ID) 2950
Total energy: -164969.0 ( -69.43 by residue)
QMean score : 0.430
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