Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDTVYVKYVCQEKPETMEEKLIYYFSQDKCEGNAEMKSLLGGKGANLAEMCNIGIPVPPGFTISTSACKSYY-QGNGLSDDLCSTIKEYMTMLENDIGCKFGDSNNPLLVSIRSGSVNSMPGMLDTILNAGLNDTTVIGLAKKSG-ERFAYDSYCRFIMMYSNVVLQLDHQLFQSIIDNERQKNGAKSLADLNVDVLKRIVCDFKKIVHEK-TEKHFPQDIEEQLLSSVNAVFASWQNERAVSYRKIHNIPENLGTAVNVQAMVFGNLNNNSATGVIFTRNPSTGEKKCFGEFLVNAQGEDVVSGVYTPIPINGKQENTMEKLMLSVYQELCEVCKKLEVHYKDMQDIEFTVQGGKLWILQTRSGKRTAEATVRITVDMVNEGTITKEEGILKIDPKIFDNLLHPVL--EARGDQKVIGKGLPASPGVASGYVVFSASDAEKAAEQGKKIILVRLETSSEDINGMNAASGIITARGGMTSHAAVVTRGMGKPCICSVNGLHIDKNGNFFSVGDTTVNKGEPITINGGTGEVMLGILPTILPELSQEFKTIINWIDETKMIKVRANADTPKDAKIAKEFGAEGIGLCRTEHMFFASNRIEFIQRLIIADDKTERASALSKLEEMQKSDFKEIFSIMGGREVTIRLLDPPLHEFLPDNQSTIEKIAKSLNKSVESVKNKIVQLSEKNPMLGHRGCRLAISHPEIYSMQTRAILSAVDELKKEKKAEVKPEIMIPFIMSEKEFILICELLKKEAKNF------DVNYSIGTMIELPRAALIADKLAKYAEFFSFGTNDLTQTTMGLSRDDSVSFLNSYKENNIFENDPFEVLDVEGVGELIKIAIERGKKTRKEIKLGVCGEHGADPRSIEFLIKSGVSYISCSPYRVPIAKLVAAQKSKCVG
1JDE Chain:A ((1-873))------------------AKWVYKFE----EGNASMRNLLGGAGCNLAEMTILGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKKFGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDWGTAVNVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTP-----QPITQLENDMPDCYKQFMDLAMKLEKHFRDMQDMEFTIEEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQLLHPTFNPAALKAGEVIGSALPASPGAAAGKVYFTADEAKAAHEKGERVILVRLETSPEDIEGMHAAEGILTVRGGMTSHAAVVARGMGTCCVSGCGEIKINEEAKTFELGGHTFAEGDYISLDGSTGKI-----ETQEASVSGSFERIMVWADKFRTLKVRTNADTPEDTLNAVKLGAEGIGLCRTEHMFFEADRIMKIRKMILSDSVEAREEALNELIPFQKGDFKAMYKALEGRPMTVRYLDPPLHEFVPHTEEEQAELAKNMGLTLAEVKAKVDELHEFNPMMGHRGCRLAVTYPEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHGGDPSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAALNNK


General information:
TITO was launched using:
RESULT:

Template: 1JDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -390538 for 8028 contacts (-48.6/contact) +
2D Compatibility (PS) -90948 + (NN) -32461 + (LL) 2452
1D Compatibility (HY) -76800 + (ID) 21950
Total energy: -610245.0 ( -76.01 by residue)
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_1JDE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JDE-query.scw
PDB file : Tito_Scwrl_1JDE.pdb: