Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGNLSGTVDEVYGDHIILNVNDVGYIIYLSAKALNVCYIGSKIKLLIETCANNRENTTQLYGFINKEEQSCLRLLVKVSGVSYKTAMSILSKLTPEQLFLAIMNEDKIAL-KISGLGPKLINRIITELSGKVSKLETNNNNFYPINEDAVSALINLGYEKTKVYDTIKKYKPNLDTKDIIRTALKELSNYEIDIMQ
1X2I Chain:A ((12-65))
--------------------------------------------------------------------------IVEGLPHVSATLARRLLKHFGS---VERVFTASVAELMKVEGIGEKIAKEIRRVITAPYIE--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38608 for 345 contacts (-111.9/contact) +
2D Compatibility (PS) -5717 + (NN) -1936 + (LL) 9316
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -41045.0 ( -118.97 by residue)
QMean score : 0.754
(partial model without unconserved sides chains):
PDB file :
Tito_1X2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X2I-query.scw
PDB file :
Tito_Scwrl_1X2I.pdb
: