Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
3ARN Chain:A ((38-148))
------------------------PTRGSARAAGYDLYSAYDYTI--PPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDV--GAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQAL-----------------
General information:
TITO was launched using:
RESULT:
Template:
3ARN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57729 for 716 contacts (-80.6/contact) +
2D Compatibility (PS) -12178 + (NN) -5935 + (LL) 2300
1D Compatibility (HY) -10000 + (ID) 2350
Total energy: -85892.0 ( -119.96 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_3ARN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ARN-query.scw
PDB file :
Tito_Scwrl_3ARN.pdb
: