Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYDYERGIENNVALTFGNFDGIHLGHELAISTLKKIAQERGFPSAILTFEPHPSTILFNRNNFRLINQEQKKELISSYGIDYLYIINFNKGFSQISCDDFISKILIDRYNTKHIIVGESCTFGHKRLGNTLILRKHSETYGYSLTKLEPLTVNGKICSSSSIREHIQKGEIEIANKLLGRSYQVSGTVMKGALR-GREIGFPTINIPIEDCMI---KPKFGTYYAKVAFTSLDVIPARDAGIYRSQYQSNETTEGSAKGSFSGSGPSWLYGVVNIGMRPTFNDLKKPIVEMHIF-DFNEDIYDRKVNIQLLKFIRSEKRFLSVDELTKQINHDILEAYQLRTDL--------------- |
| 1NB9 Chain:A ((1-147)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RHLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASV----------------------------------GSGDVHKMVVSIGWNPYYKN-TKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKEDNFFQVSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67445 for 844 contacts (-79.9/contact) +
2D Compatibility (PS) -13869 + (NN) -2437 + (LL) 12924
1D Compatibility (HY) -6800 + (ID) 1900
Total energy: -79527.0 ( -94.23 by residue)
QMean score : 0.432
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