Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIALKYRPGSFKDLVGQDILVRILENAFTLNRIPQSILLSGASGVGKTTTARIIALCLNCSLGPTFEPCGSCKNCLTIKNSSHPDVIEIDAASHTSVDDIKVILGDICYSPISSKFKVYIIDEVHMLSSSAFNALLKTLEEPPPSVKFILATTEIKKIPITIIARCQRFDLYNIPVAKIVERLNDIAQRESYFIEKEASELIARHSGNSMRNALFLMNQAVLYNKGGVISTKSVMDILGLVDKDIIFDLMEAILGSDLQKALSLFDKA----VETANPLSIFEGLLQTIQLICRFLVTKEIDSSVTECEKNRIKDLGVKKSLIFFSRLWRMLLKGVQDIKASTCSDVAAEMILI-SLCYLSDLPSPEQVVKKVLAQSTQQRNTRSAENIQQKSYDFDKILQLLQQNNQIYLYKQLCSNLQLVNCKPGYLKLKAVSQLDSNFCNDLKNYLSQITQQEWVITIDAGYIKKGASSLSYAPAVKGILDTFKGAKVVNIENKE |
| 3GLG Chain:H ((28-390)) | --LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATADPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQV-STQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIEL---RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GLG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227217 for 2865 contacts (-79.3/contact) +
2D Compatibility (PS) -38722 + (NN) -23539 + (LL) 10020
1D Compatibility (HY) -24000 + (ID) 7000
Total energy: -310458.0 ( -108.36 by residue)
QMean score : 0.511
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