Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLAKGKEMGKLEGKIALIAGASGGMGSAVAKRFVREGAYVILISRSIDN-LKQLYDEIEKLDEFKEGSVKLIQLDLLDFENVKILANMIESLKLSESGALDILVACTGILGKLNLVHDCELEELQNVMNTNFTANWYLLKNLDPVLKKSN-SGRVIFMTSEVTLSPSSYPYWVPYAASKAALEIMVKIYASETKHTKLCVNAVYSEGPVDSEMYKQAFPGK--------DIS-EL-ILPNKLTDKFVELASEDCS-ISGQVLPLSKSLE
1GEE Chain:A ((2-249))--------YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV----GGEAIAVKGDVTVESDVINLVQSAI----KEFGKLDVMINNAGLENP-VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP--WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNN-IGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT


General information:
TITO was launched using:
RESULT:

Template: 1GEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155111 for 2002 contacts (-77.5/contact) +
2D Compatibility (PS) -25407 + (NN) -11908 + (LL) 1436
1D Compatibility (HY) -9600 + (ID) 3150
Total energy: -203740.0 ( -101.77 by residue)
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_1GEE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GEE-query.scw
PDB file : Tito_Scwrl_1GEE.pdb: