Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLIPIVIEQTSRGERAYDIYSRLVKERIIFVTGPVEDNMASVIVAQLLFLESENPDKDIYMYINSPGGVVTAGLSIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTEGKRYSLPHSRIMIHQPSGGYQGQATDIEIHANEILRVKRKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEARRIGLIDRVIAERKDIKVENIKVEQKVG
2FZS Chain:G ((2-193))
--LVPMV---------SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN--------------
General information:
TITO was launched using:
RESULT:
Template:
2FZS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113733 for 1380 contacts (-82.4/contact) +
2D Compatibility (PS) -19714 + (NN) -9126 + (LL) 2020
1D Compatibility (HY) -25600 + (ID) 6100
Total energy: -172253.0 ( -124.82 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_2FZS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FZS-query.scw
PDB file :
Tito_Scwrl_2FZS.pdb
: