Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNYRFGTKVLIIGSGAAGYAAAIYAARANLEPVVVTGMQPGGQLTITMGVENYPGFVSIQGPELMKQMRLHVEKVGAEIVNDEIKSVEQLEYSNEYKFRSSGNNDDYYSNAVIIAAGSQAKWLGLESERKFQGYGVSACATCDGAFFRNKIVAVIGGGNTAVEEAIFLTRFAKEVILIHRRDKLRAEKIMQDRLFANNKIKVIWNHTVEQVLGEENPKKVTGITIKSTKIDEIQELRVNGVFIAIGHAPNTGVFKSF-IEMDEQGYIITKPGTTLTSRAGVFAAGDVQDKV--YRQAVVAAGTGCMAALDAEKFLECTSK |
| 3F8P Chain:B ((18-316)) | ---------VIIVGLGPAAYGAALYSARYMLKTLVI-GETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIE------EFVVKTK-RKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGD---KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMR-TSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3F8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -234810 for 2566 contacts (-91.5/contact) +
2D Compatibility (PS) -31078 + (NN) -10481 + (LL) 944
1D Compatibility (HY) -26800 + (ID) 5550
Total energy: -307775.0 ( -119.94 by residue)
QMean score : 0.530
|
|
|