Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLNEQPDVLTFLNSNLKGISKFHFGILSKLCGGNKVMDLLFYRPLSYVDRSKSLLDARVGELTTFIAKIYEHQPPTFRGRPYKIVVESKSQYIFIVFFNYSIKYLYKLFPIGANVIISGKLEKFAEHWQVTHPDYVLLDTNQFEEIARVEPVYQLCRGITNKSIRNIINSNLKELPDLPEWIGDTLIKQNKWLSWKESIIKLHRPNSLAEAEICRRRLAYDELFAYQMALKLARENHVRKRGREFTISNKYKEQVLNELSF-QLTNDQIRAIDEISERQKSKCRMVSLLQGDVGSGKTVVALFAMLNVIENNMQAALMAPTTILAEQHYNWIEEALSYTDIKIALLTGKTTRKERKIITNEL--ASGILKIIIGTHALFQAN----------VTFKNLGLAVIDEQQRFG---VIQRNCLV------GKGENADILFVTATPIPRTLQQAIYG-DVECSILREKPKSRLPIKTVAMNIK-----KLVEVIEKLKSAINRGEKAYWICPCIGGNEGLNIAAAEMRFQELQKTFFN-KVGIIHGKLTQVQKDQVMFSFKRNEFPLLVATTVIEVGIDVPDATIMIIENAEQFGLSQLHQLRGRVGRGNKPSFCVLLYNNISKSSFSKLKIMCESQDGFYIAEKDMMLRGSGDILGLKQSGCMEFKFADLYKDRELLNLAYNNTKSAIAENKSFELLLDIFEYRSRLHFSKFQ |
| 2V1X Chain:A ((27-375)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PWSGKVKDILQNVFKLEKFRPLQLETINVTMAGK------EVFLVMPTGGGKSLCYQLPALCS---DGFTLVICPLISLMEDQLMVLKQLG----ISATMLNASSSKEHVKWVHAEMVNKNSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRY-KGQSGIIYCFSQ--------KDSEQVTVSLQN--LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSK-SMENYYQESGRAGRDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVWACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V1X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189295 for 2496 contacts (-75.8/contact) +
2D Compatibility (PS) -34838 + (NN) -11384 + (LL) 19164
1D Compatibility (HY) -11200 + (ID) 3150
Total energy: -230703.0 ( -92.43 by residue)
QMean score : 0.420
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