Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------MSWARSSAILMLSTFAAGYQEEVLTLMEKEEEEFLSHEQVKALLEKIRGEV------LKTPIWHNV-MDPVDDFVGRVMN |
| 3KDG Chain:A ((433-627)) | MDRVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVGEVEPEVQEMIVPLTFHYSTNEALIIEQHKQELESVGVFLESFGSNSYIVRCHPAWFPKGEEAELIEEIIQQVLDSKNIDIKKLREEAAIMMSCKGNRHLRNDEIKALLDDLRSTSDPFTCPHGRPIIIHHSTYEMEKMFKRVM- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3733 for 280 contacts (-13.3/contact) +
2D Compatibility (PS) -7680 + (NN) -2029 + (LL) -80
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -16222.0 ( -57.94 by residue)
QMean score : 0.385
|
|
|