Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKEERTMTNYTVDTLNLG---KFITESGEVIDNLRLRYEHVGYHGQ-PLVVVCHALTGNHLTYGTDDYPGWWREIIDGGYIPIHDYQFLTFDVIGSPFGSSSPLNDPHFPKKLTLRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNQQFEVDKAIIL---------AATSRTSSYSRAFNEIARQAIHLGGKEGLSIARQLGFLTYRSSKSYDERFTPDEV-----VAYQQHQGNKFKEHFDLNCYLTLLDVLDSHNIDRGRTD-VTHIFKNLETK-----VLTMGFIDDLLYPDDQVRALGERFKYHRHFFVPDNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK |
| 1CQW Chain:A ((1-295)) | -------------IGTGFPFDPHYVEVL-----GERMHYVDVGPRD-GTPVLFLHGN--------PTSSYL-WRNIIP--HVAPS-HRCIAPDLIG--MGKSDKPD---L--DYFFDDHVRYLDAFIEALGLEEV-VLVIHDWGSALGFHWAKRN-PERVKGIACMEFIRPIPTWDEWP------EFARETFQAFRTA-----DVGRELIID-QN--AFIEGVLP-KCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQ-SPVPKLLFWGTPGVLIPPA-EAARLAESLPNCK-TVDIGPGLHYLQEDNPDLIGSEIARWLPGLASGLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169939 for 2212 contacts (-76.8/contact) +
2D Compatibility (PS) -29313 + (NN) -10801 + (LL) 1052
1D Compatibility (HY) -8400 + (ID) 2350
Total energy: -219751.0 ( -99.34 by residue)
QMean score : 0.449
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