Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHYQIVIIGGGTAGVTVASRLLRKNQNLKEKIAIIDPADHHYYQP-LWTLVGAGVSSL-K-SSRKDMESVIP-EGANW-IKQAVSSFQPENNSVILG-----DNTVVYYDFLVVAPGLQINWSSIKGLKENIGKNGVCSNYSPDYVNETWNQISNFKQGNAIFTHPNTPIKCGGAPMKIMYLAEDYFRKHKIRSNANVIYATPKDALFDV--GKYNKELERIVEERNITVNYNYNLVEIDGDKK---------------------VATFEHIKAYDRKTISYDMLHVTPPMGPL-DVVKESTLS-DSEGWVDVNPTTLQHKSYSNVFALGDASNVPT--------SKTGAAIRKQAPIVANNLLQVMNNQMLTHHYDGYTSCPIVTGYNRLILAEFDYNKNTKETMPFNQAKERRSMYIFKKDLLPKMYWYGMLKGLI |
| 3NTD Chain:A ((1-338)) | ---MKKILIIGGVAGGASAAARAR--RLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDN----PLTHSLRNIPDMDRILQTIQM--------NNVEHATVVGGGFIGLEM--MESLHHLG----IKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSN-----GELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNA-MMQ-TSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGR------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160876 for 2426 contacts (-66.3/contact) +
2D Compatibility (PS) -32297 + (NN) -14669 + (LL) 6760
1D Compatibility (HY) -6000 + (ID) 2300
Total energy: -209382.0 ( -86.31 by residue)
QMean score : 0.458
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