Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMG-TTEIKGKPKRVVTLYQG-ATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVFK-FKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYA-GGYA-GEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNL-AGGYKSSLKLIDDLYEKLNIEKQSK |
| 2WI8 Chain:A ((17-299)) | ----------------------------------SEKKKI-EYLDKTYEVTVPTDKIAITGSVESMEDAKLLDVHPQGAISFSGKFPD--MFKDITDKAEPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKEKKAKKIIADYEQDLKETKTKINDKA-KD--SKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKA-----AKAQELISLEKLSEMNPDHIFVQFSDDENA---DKPDALKDLEKNPIWKSLKAVKEDHVY-VNSVDPLAQGGTAW-SKVRFLKAAAEKLTQNK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WI8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16849 for 2277 contacts (-7.4/contact) +
2D Compatibility (PS) -29378 + (NN) -10757 + (LL) 2964
1D Compatibility (HY) -9600 + (ID) 3550
Total energy: -67170.0 ( -29.50 by residue)
QMean score : 0.446
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