Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHET--STTPEERERAFTDMIEIALSLV
3U40 Chain:E ((11-240))---TPH-NGAKYGEIAETVLMAGDPLRVKLLADTYLTDVVQYNSVRGAVGYTGYYKGVKLSVQAHGMGMPSIGIYAYELFNFYGVKRIIRIGSAGAFDESLKLGDIVIGMGACYDSNFERQYDIPGKYSCIADFQLCREAVDAAEKLGYRYKVGNIYSANYFYD-DGDHSGAWKKMGVLAVEMEAAALYMIAARARKQALCMLTISD-LCYGSGEKMT------KFTQMMEVALSL-


General information:
TITO was launched using:
RESULT:

Template: 3U40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -166977 for 1892 contacts (-88.3/contact) +
2D Compatibility (PS) -23797 + (NN) -6498 + (LL) 1200
1D Compatibility (HY) -24800 + (ID) 5800
Total energy: -226672.0 ( -119.81 by residue)
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_3U40.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U40-query.scw
PDB file : Tito_Scwrl_3U40.pdb: