Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKY--DQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDMETLISFLKLNKDQPQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIADVCI----ASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQIDNG--DAHAIYNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLLK- |
1F0K Chain:A ((7-357)) | ---KRLMVMA----GGTGGHVFPGLAVAHHLMAQGWQVRWLG------TADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSL----GIPVVLHEQN---------GIAGLTNKWLAKIATKVMQAFP------GAFPNAEVVGNPVRTDVLALPLPQQRLA----------------GREGPVRVLVVGGSQG-ARILNQTMPQVAAKLGDSVTIWHQSGKGS-QQSVEQAYAEAGQPQHKVTEFID--DMAAAYAWADVVVCRSGALTVSEIAAAGLP-------ALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRVARAL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1F0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -175469 for 3028 contacts (-57.9/contact) +
2D Compatibility (PS) -36894 + (NN) -8619 + (LL) 3668
1D Compatibility (HY) -800 + (ID) 2900
Total energy: -221014.0 ( -72.99 by residue)
QMean score : 0.327
|
|
|