Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFIVIKIGGSTLSDMH--PSIINNIKHLRSNNIYPIIVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLDAQLFEITSF--DQQYGYVGVPTALNKDALQYLCT-KFVPIINSIGFNNHDGEFYNINADTLAYFIASSLKAP-IYVLSNIAGVLINDVVIPQLPLVDIHQYIEHGDIYGGMIPKVLDAKNAIENGCPKVIIASGNKPNIIESIYN-NDFVGTTILNS
2BTY Chain:A ((21-279))
GKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGE-DGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRDGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKE-
General information:
TITO was launched using:
RESULT:
Template:
2BTY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -228924 for 2152 contacts (-106.4/contact) +
2D Compatibility (PS) -27788 + (NN) -12632 + (LL) 16
1D Compatibility (HY) -17200 + (ID) 4750
Total energy: -291278.0 ( -135.35 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_2BTY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BTY-query.scw
PDB file :
Tito_Scwrl_2BTY.pdb
: