Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVLNIFTIAFKSILKNKGRNIFTMIGIIIGISS--VITIMS---LGNGFKKTAA------------DQFSDAG-----------AGKQEALISFTF---KVDEKIKKYPFNQRDIELVNQVDGV---------LDAKLKENKEEGIEATITNVQKKSDIFIIKKQNLHSFKVGRGFDKEDNELRKKIVVINDQVAKTVFNN--NAIGKSLYIEGQGFEVIGITDKLYSDSSTVIMPENTFNYYMGHLHQGLPTLQIIIEDGYNKKTVVKKVESLLN-----KKGSGSVLGEY--TYTDTEEI----------IKSIDKIF--DSITYFVAAVAGISLFIAGIGVMNVMYISVAERTEEIA-----IRRAFGAKSRDIELQFL-IESILICVTSGFIGLI-------LGVVFATIIDVLTPDYIKSVVSLSSVIIAVSVSILIGLLFGWIPARAASKKEL------IDIIK-- |
| 4O2X Chain:A ((5-483)) | -EGKLVIW------INGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLI-----AADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTF--KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALAAAQTNAAANLEKIKKLRNVITSAWKVILYNDDIHNFTYVTDVIVKVVGQ---ISKAKAHTITVEAHSTGQALILSTWKSKAEKYCQELQQNGLTVSIIHES |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119756 for 2908 contacts (-41.2/contact) +
2D Compatibility (PS) -38863 + (NN) 140 + (LL) 1628
1D Compatibility (HY) -10000 + (ID) 3800
Total energy: -170651.0 ( -58.68 by residue)
QMean score : 0.177
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