Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYEN--DMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYSINMNMYTRLLLLDENDHLTTKGSLS--RDYAVNKDNKAFYFLLR--DDDYFAKVVNG---QARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKNAYQATFQRNPGFNETEKGSYGSPKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIKFYRGDKFKIASPITPLVDTGNEQRQDLEKVEKAINQ-------- |
| 4P0G Chain:A ((7-435)) | --------------------APTALERVQKEGVLRVITRNSPATYFQDRNGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSRE-------------GGPALAAAGLTPGREDDASVRYSH------------------TYLDVTPQIIYRNGQQRP--TRPEDLVGKRIMVLKGS---SHAEQLAELKKQY---------PELKYEESDAVEVVDLLRMVDVGDID--------LTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKDRYYG-----HVDVLGYVGAYTFAQHLQQRLPRYESHFKQSGKQLDTD----WRLLAAIGYQESLWQPGA--TSKTGVRGLMMLTNRTAQAMGVS---------------------------------NRLDPKQSIQGGSKYFVQIRSELPESIK---------------------------EPDRSWFALAAYNIG---------------GAHLEDARKMAEKE------------GLNPNKWLDVKKMLPRLAQKQWYAKTRYGYAR--------GGETVHFVQNVRRYYDILTWVTQPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 124140 for 3403 contacts (36.5/contact) +
2D Compatibility (PS) -43182 + (NN) -8784 + (LL) 11172
1D Compatibility (HY) -11200 + (ID) 3850
Total energy: 68296.0 ( 20.07 by residue)
QMean score : 0.198
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