Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEIKYKVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARDRDIDGVIDFYGYSRINTEPFK-TTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLPPVFIAHCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITMV
3H04 Chain:A ((3-274))
--EIKYKVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARDRDIDGVIDFYGYSRINT-EPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLPPVFIAHCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM-
General information:
TITO was launched using:
RESULT:
Template:
3H04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -203547 for 2299 contacts (-88.5/contact) +
2D Compatibility (PS) -29453 + (NN) -12997 + (LL) 556
1D Compatibility (HY) -40800 + (ID) 13400
Total energy: -299641.0 ( -130.34 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_3H04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H04-query.scw
PDB file :
Tito_Scwrl_3H04.pdb
: