Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQKPVDNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTIV-EPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEEH-GYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAK--ELGKGKTVVTVLPSNGERYLSTPLYSFDD |
| 4AIR Chain:B ((35-334)) | -------SIDQLIGQTPALYL-NKLNNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSVVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVTMAKKIVTANPNAVLADQFATKYNALIHEETTGPEIWEQ-TNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPME--------------------------DRSLIDEVFCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKIAERPEM-EGKTIVTIIPSFGERYLSTALY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68079 for 2367 contacts (-28.8/contact) +
2D Compatibility (PS) -30493 + (NN) -18642 + (LL) 464
1D Compatibility (HY) -25200 + (ID) 6350
Total energy: -148300.0 ( -62.65 by residue)
QMean score : 0.522
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