Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTP--TINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGD-KITLGFKEDQYKETWLA
3NZN Chain:A ((24-102))
-VIMYGLSTCVWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNP------------------------SVS----------------FPTTIINDEKAIVGFKEKEIRESLG-
General information:
TITO was launched using:
RESULT:
Template:
3NZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38704 for 528 contacts (-73.3/contact) +
2D Compatibility (PS) -8251 + (NN) -1527 + (LL) 3096
1D Compatibility (HY) -6400 + (ID) 900
Total energy: -52686.0 ( -99.78 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_3NZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NZN-query.scw
PDB file :
Tito_Scwrl_3NZN.pdb
: