Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRQARPEDRFDIAKLVYMVWDD--MELELVKHLPKD--MVLDAIEKSCVDATYRTFYQHILVYEV-ENKVAGCIISYSGENELKYEKAWE----L-LDLPEEIKQYGTPLPVKEAKDDEYYIETIATFAAYRGRGIATKLLTSLLESNTHVKWSLNCDINNEAALKLYKKVGFISDGQIELY--KHMYHHLIVK
2QEC Chain:A ((5-197))
TVLPATQADFPKIVDVLVEAFANDPTFLRWIPQPDPGSAKLRALFELQIEKQY--AVAGNIDVARDSEGEIVGVALWDRPD----------PRLVSIFG-KAA--------ARFHPKFPHWYLYTVATSSSARGTGVGSALLNHGIARAGDEAIYLE--ATSTRAAQLYNRLGFVPLGYIPSDDDGTPELAMWK-
General information:
TITO was launched using:
RESULT:
Template:
2QEC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106398 for 1103 contacts (-96.5/contact) +
2D Compatibility (PS) -17071 + (NN) -7803 + (LL) 1736
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -134486.0 ( -121.93 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_2QEC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QEC-query.scw
PDB file :
Tito_Scwrl_2QEC.pdb
: