Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNKREDVRNIAIIAHVDHGKTTLVDELLKQSGIFRENEHV-DERAMDSNDIERERGITILAKNTAVDYKGTRINILDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALEQNLKPVVV-VNKIDKPSARPEGVVD--EVLDLFIELEAND--EQLEFPVVYASAVNGTASLDPEKQD-------------DNLQSLYETIIDYVPAPIDNSDEPLQFQVALLDYNDYVGR--IGIGRVFRGKMRVGDNVSLIKLDGTVKNFRVTKIFGYFGLKRLEIEEAQAGDLIAV----SGMEDINVGE------TVTPHDHQEALPVLRIDEPTLEMTFKVNNSPFAGREGDFVTARQIQERLNQQLETDVSLKVSNTDSPDTWVVAGRGELHLSILIENMRREGYELQVSKPQVIIKEIDGVMCEPFERVQCEVPQENAGAVIESLGARKGEMVDMTTTDNGLTRLIFNVPARGMIGYTTEFMSMTRGYGIINHTFEEFRPRIKAQIGGRRNGALISMDQGSASTYAILGLEDRGVNFMEPGTEVYEGMIVGEHNRENDLTVNITKTKHQTNVRSATKDQTQTMNRPRILTLEEALQFINDDELVEVTPESIRLRKKILNKNVREKEAKRIKQMMQENE |
| 1HA3 Chain:A ((13-318)) | ---------NVGTIGHVDHGKTTLTAALTFVTAAENPNVEVKDYGDIDK------------TAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVD--------MVDDPELLDL-VEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKP--FLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGV----EMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80812 for 2039 contacts (-39.6/contact) +
2D Compatibility (PS) -28167 + (NN) -4430 + (LL) 23988
1D Compatibility (HY) -14000 + (ID) 4700
Total energy: -108121.0 ( -53.03 by residue)
QMean score : 0.423
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