Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDY------SLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQ----IQRYIQQLEDLE---------
2AO9 Chain:A ((13-132))
-----------MMAKLDELKQKLTAKQIQAAYLLVENELMEEEKRTQDEMANELGINRTTLWEWRTKNQDFIA-FKSEVADSFLAEKREQVYSKLMQLILGPQPSVKAMQLYMQRFGLLTDKKVIEGDL
General information:
TITO was launched using:
RESULT:
Template:
2AO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23999 for 571 contacts (-42.0/contact) +
2D Compatibility (PS) -10634 + (NN) -4889 + (LL) 684
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -45438.0 ( -79.58 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_2AO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AO9-query.scw
PDB file :
Tito_Scwrl_2AO9.pdb
: