Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKSDQ
4OTA Chain:F ((1-54))
-PIAQIHILEGRSDEQKETLIREVSEAISRSLDAPLTSVRVIITEMAKGHFGIGG------
General information:
TITO was launched using:
RESULT:
Template:
4OTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20865 for 277 contacts (-75.3/contact) +
2D Compatibility (PS) -6171 + (NN) -3563 + (LL) 580
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -36319.0 ( -131.12 by residue)
QMean score : 0.707
(partial model without unconserved sides chains):
PDB file :
Tito_4OTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OTA-query.scw
PDB file :
Tito_Scwrl_4OTA.pdb
: