Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQEKTYTVQELTDARASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFTR-------GIIANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKGKKDLAE---GVNGKA--------------PEAYPHPIYNNVLPHIDVFLENGY--TKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVTLDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLEN--TFHVWCTSDNLLKGAALNAVQVLEQVMRLKGAN |
3TZ6 Chain:A ((3-338)) | --SIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPS-GLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVN---FERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGATGVQLVDVP----TPLA--AAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145390 for 2721 contacts (-53.4/contact) +
2D Compatibility (PS) -32996 + (NN) -11225 + (LL) 1304
1D Compatibility (HY) -22000 + (ID) 6800
Total energy: -217107.0 ( -79.79 by residue)
QMean score : 0.488
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