Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDLNKKYLIDLHQHQNSSIEVLREFAE-GNEVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFAS-ISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKV-YDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKGE
4OA5 Chain:A ((16-227))
--SKQDEYLNKLFAVDTEGALKAHKTAPSELRMAQLGTVEGQMLQLLIRMAGIHSIVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGEALAQLNTLKEMAPFDMIFIDANKSSYLAYLNWAKMYIRKGGLIVADNTFLFGSVFDEHPTEKVS-SNAHASMRAFNDELANKEKYLSTIIPTSEGMMVSIKLT
General information:
TITO was launched using:
RESULT:
Template:
4OA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123340 for 1742 contacts (-70.8/contact) +
2D Compatibility (PS) -22902 + (NN) -8205 + (LL) 324
1D Compatibility (HY) -13600 + (ID) 2450
Total energy: -170173.0 ( -97.69 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_4OA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OA5-query.scw
PDB file :
Tito_Scwrl_4OA5.pdb
: