Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNK-PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVY--KQPVCKVCGSQIETKIIATRNSHYCPVCQK |
1K82 Chain:B ((1-268)) | -PELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVS--EEIYR---------LSD-QPVLSVQRRAKYLLLELP----EGWIIIHLGMSGSLRILPE----ELPP-EKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYL---HQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK--------PGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139627 for 2101 contacts (-66.5/contact) +
2D Compatibility (PS) -27097 + (NN) -9453 + (LL) 1496
1D Compatibility (HY) -18400 + (ID) 4900
Total energy: -197981.0 ( -94.23 by residue)
QMean score : 0.341
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