Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------MLKRSLLFLTVL--LLLFSFSSITNEVSASSSFDKGKYKKGDDASYFEPTGPYLMVNVTGVDS-KGNELLS----------PHYVEFP-IKPG---TTLTKEKIEYYVEWALDA--TAYKEFRVVELDPSAKIEVT-YYDKNKKKEETKSFPITEKG----FVVPDLSEHIKNPGFNLI-TKVVIEKK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3VWA Chain:A ((1-540)) | PLHMSISNFQFPYTIEETAITETALWQCFDGTRKADSLPVTVFKAKRSPENESLILNAVHKSKILKIPGLCTVLETFDSDPQSTFIVTERVVPFPWDNLGSLSQNKFGVELGISQLLATLGFLKNFVLGTLSKDSVFINIKGEWVLFGLEL----CSSKEGLSAFEFASRARSYYNIIGSQLPCEDPNTIDSMGLGLLIKSLMAPSCLPKDWIVNVNMISDGKITIENFRKRLENTETWRSNPLINFYQELRELHIKDPQGKLVVMSNLENLYLESREIFRNLTPGMIENFIIPELCEIIKL-----LMTQSISSNASHKLVPFLAIVLDLTSETNTFPVGFNDLITQSFKLPDRQVRFLLLIYLPKLIGPLSKSEISSRIYPHFIQGLTDSDATLRLQTLKTIPCIVSCLTERQLNNELLRFLAKTQVDSDVEIRTWTVIIISKISTILSTSVGNRSNILATAFTKSLKDPQVKPRLAALYGLEKSIELFDVNTIANKILTVIAPGLLDKSPIVRGRAKILFEEYLEKLEKEAQLIQTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18434 for 857 contacts (21.5/contact) +
2D Compatibility (PS) -15544 + (NN) 2002 + (LL) 196
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -3962.0 ( -4.62 by residue)
QMean score : 0.112
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