Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQ----FPESQLFEDTVEREMIFGP-KNFKMNLDEAKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVVDEPTAGLDPQSKRQVMRLLKSLQTDENKAIILISHDMNEVARYADEVIVMKEGSIVSQTSPKELFKDKKKLADWHIGLPEIVQLQYDFEQKYQTKLKDIALTEEAFVSLYKEWQHEK
2OLK Chain:B ((38-247))
--------------------EVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINL--KAKDTNLNKVREEVGMVFQRFNLFPHM-----TVLNNITLAPMKVRKWPREKAEAKAMELLDKVGL-KDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQL-ANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLF----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OLK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119313 for 1605 contacts (-74.3/contact) +
2D Compatibility (PS) -22651 + (NN) -14763 + (LL) 6448
1D Compatibility (HY) -18000 + (ID) 3500
Total energy: -171779.0 ( -107.03 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_2OLK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OLK-query.scw
PDB file :
Tito_Scwrl_2OLK.pdb
: