Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKVYFNHDGGVDDLVSLFLLLQME-NVQLIGVSTIGADCYLEPSLSASVKIINRFSNE-DI---QVAPSYERGKNPFPKEWRMHAFFMDALPILNEPVKHV-----ASNVSDKEAFEDIIQTLKRQSEKVTLLFTGPLTDLAKALQKDSS-IVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDPEAVKIVFDSD-IEIDMVALESTNQVPLTLDVRQRWANERQYTGIDFL-GVSYAAVPPLTHFITNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGP-SQGKTFEC--KDGRKINVINHVDNNAFFDYITALAKKVN |
| 3EPW Chain:A ((13-338)) | -AKNVVLDHDGNLDDFVAMVLLASNTEKVRLIGALCTDADCFVENGFNVTGKIMCLMHNNMNLPLFPIGKSAATAVNPFPKEWRCLAKNMDDMPILNIPENVELWDKIKAENEKYEGQQLLADLVMNSEEKVTICVTGPLSNVAWCIDKYGEKFTSKVEECVIMGGAVDVRGNVFLPSTDGTAEWNIYWDPASAKTVFGCPGLRRIMFSLDSTNTVPVRSPYVQRFGEQ-TNFLLSILVGTMWAMCTHCELLRDGDGYYAWDALTAAYVVDQKVANVDPVPIDVVVDKQPNEGATVRTDAENYPLTFVARNPEAEFFLDMLLRSARAC- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -168692 for 2959 contacts (-57.0/contact) +
2D Compatibility (PS) -33149 + (NN) -14867 + (LL) 228
1D Compatibility (HY) -20000 + (ID) 4900
Total energy: -241380.0 ( -81.57 by residue)
QMean score : 0.449
|
|
|