Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATRTQARGAVVELLYAFESGNE-EIKKIASSMLEEKKIKNNQLAFALSLFNGVLEKINEIDALIEPHLKDWDFKRLGSMEKAILRLGAYEIGFTPT-QNPIIINECIELGKLYAEPNTPKFLNAILDSLSKKLAQKPLI
1TZV Chain:A ((2-138))
KTPRRRMRLAVFKALFQHEFRRDEDLEQILEEILDE-TYDKKAKEDARRYIRGIKENLSMIDDLISRYLEKWSLNRLSVVDRNVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTENSGKFVNGILDRIAKEHAPKEKF
General information:
TITO was launched using:
RESULT:
Template:
1TZV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92865 for 1007 contacts (-92.2/contact) +
2D Compatibility (PS) -14092 + (NN) -6103 + (LL) 64
1D Compatibility (HY) -10400 + (ID) 2100
Total energy: -125496.0 ( -124.62 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_1TZV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TZV-query.scw
PDB file :
Tito_Scwrl_1TZV.pdb
: