Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------MGTLIEKWFGFSQIREELEARISELEDENTELLREREYLAAETSELKDANDQLRQKNDKLFITKDKLTKENTELFAENESLSVKISGLEHSNDQLWQNNNKLTKEKAELKTEKDILAKENTRLLAARDRLTEEKRELTTEKERL----KRENTELTHKITELTKENKALTTENDKLNHQVTALTNERDSLEQERARLQDAHGFLEKRCTNL---------EKENQRLTDKLKQLESAQKSLENTNNQLRQALENSNVQLAQAKEKIAIEKSELEREI-ARLKSLEGMEAKSDLDLHNRRLASANEDLKRQNRKLEEENIALKERVDGLNEQLSKLQPQKPQ-------------------------------------------------------------------------------------------------------------------------------------------- |
4H5Y Chain:A ((36-570)) | PFKTSFEKWIESSLLDPQAKEDKGSTINLGREGLKNASQVKKFLLSPAGKDVIAELGAQMALQRNINLQNQQDRMEHELFKRRLMAALFLWYLSKKSHAAEKVKEIIREYNEKAIKNAEKASSSTSQADKEIQKMLDEYEQAIKRAQENIKKGEELEKKLDKLERQGKDLEDKYKTYEENLEGFEKLLTDSEELSLSEINEKMKAFSKDSEKLTQLMEKHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVSSLKDAHLAINKDQEVVEHKGQFYLLQKGQWDAIKNDPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINDLIMSTDPKENEEATKLLHKHNGLNLKLANLQDMLAVHRKEKSFFNEKGEKVTSLNDAHYVIGKDQQLFNLGGKFYPIHKEQKILEKDGKFYLLKQGEDWESIKDSPEKQKKAEHDFHKLQYETPMTVKKLVHHNKGLETTIHKERIEETKQQLEDNGKEKIEIANNISKLQSTVGVALNQLNQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 153140 for 1977 contacts (77.5/contact) +
2D Compatibility (PS) -35934 + (NN) -19741 + (LL) 0
1D Compatibility (HY) 800 + (ID) 2350
Total energy: 95915.0 ( 48.52 by residue)
QMean score : 0.339
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