Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIIAHSNEIAHPIFKSADKLFTLYQGDCNEVLPQF-ENAFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKENGINDIDEFNYQWINNAKKALKNTGSLLIS-----------GTYHNLFSLGRILQKLDFKILNLITWQKTNPPP------NFSCRYLTHSAEQIIWARKSYKHKHVFNYEILKKINNNKQMRDVWNFPAIAPWEKANGK--HPTQKPLALLVRLLLMASDDNSLIGDPFSGSSTTGIAANLLKREFIGIEKESRFIKISMNRKLELDARHQEIRSKIKDLNFQ-------- |
| 1BOO Chain:A ((3-322)) | ------NFGKKPAYTT--SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKE---------------YGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAEDFYWFNPSKLPSPIEWVNKRKIRVKDAVNTVWWFSKTEWPKSDITKVLASIPPNLLQISNSESNGQYLANCKLMGIKAHPARFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNISEEKITDIYNRILNGESLDLNSI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35914 for 1991 contacts (-18.0/contact) +
2D Compatibility (PS) -26698 + (NN) -6995 + (LL) 1456
1D Compatibility (HY) -8400 + (ID) 2650
Total energy: -79201.0 ( -39.78 by residue)
QMean score : 0.305
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