Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKVSVITACFNSEKTIEDTILSVLNQTYK-NIEYIIIDGASADSTLEIIQKYKDRIACVMSE-------KDEGIYDAMNKGIKRSSGDIIALLNSDDFY-KDEFVVEKVVHEFENK-NCDSVYGDLGVVKPDCLEKVVRYY----ESGEF---SPKTLLYGVVPAHPTLFVKKAIYERYGLYKTDYKISADFEMIIRLFVVQKIS-FSYLKEVLVIMRTGGVSASGFKSLLLRNKENLRACQENGIQANVFSMLLKYPRKIMGLFKRESKGSLKRND |
| 3CKJ Chain:A ((47-269)) | GRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAG--ARVVSREQALPEVPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPM-FVPWLVGPLLTGDGVHLVKSFYRRP---------GRVTELVARPLLAALRPEL-GCILQPLGGEYAATRELLTSV-PFAPG--YGVEIGLLVDTFDRLGLDAIAQVNLGVREHRNRPLAELGAMSRQVIATLLSRCGIPDSGVGLTQFVADGPEGQSYTQHTWPVSLADRPPM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110812 for 1515 contacts (-73.1/contact) +
2D Compatibility (PS) -20904 + (NN) -9332 + (LL) 948
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -147600.0 ( -97.43 by residue)
QMean score : 0.435
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